JMicrovision Software, 2019, Retrieved from. Jamzad, Salvia, In Lamiaceae, Flora of Iran, Research Institute of Forests and Rangelands of Iran, 2012. Soltis, Phylogeny and staminal evolution of Salvia (Lamiaceae, Nepetoideae) in East Asia, Annals of Botany 122 (2018), 649-668. Bilsel, Chemotaxonomic evaluation of Turkish species of Salvia: fatty acid compositions of seed oils, Biochemical Systematics and Ecology 34 (2006), 160-164. Kowalski, ed., Chemometrics, Mathematics and Statistics in Chemistry, D. Lanteri, Data analysis in food chemistry, B. This Open Access Article is Licensed under Creative Commons Attribution 4.0 International License How to cite this article: Maryam Palizdar, Reza Tavakkol Afshari, Ziba Jamzad, Parisa Nejat Khah Manavi and Mohammadreza Ardakani, Classifying salvia species by hierarchical cluster analysis of their seed features, JP Journal of Biostatistics 18(1) (2021), 111-124. Received: FebruAccepted: MaPublished: February 2, 2021 Salvia, hierarchical cluster analysis, classification, seed features. It is worth mentioning that the classification obtained in six groups based on the combination of seed morphological and colorimetric features were in agreement and very close to the classification of the same plant species mentioned in the Flora of Iran while the four-group classifications resulted based on the seed physiological or anatomical features, or the combination of all the features together, were different than what stated in the Flora of Iran. Hierarchical Cluster Analysis (HCA), conducted based on Squared Euclidean Distance and Ward's method, was able to classify the Salvia species into four and six groups depending upon the seed features used in the classification process. For this purpose, a total of 51 seed features, including the 8 morphological, 6 colorimetric, 34 physiological, and 3 anatomical seed traits, were selected and measured for all the Salvia species. This research was to develop a comprehensive seed morphological, colorimetric, physiological and anatomical database for classifying eleven Salvia species into some statistically homogeneous groups, and to compare these groups with those stated in the Flora of Iran based on the morphological characters of the same plant species. Maryam Palizdar, Reza Tavakkol Afshari, Ziba Jamzad, Parisa Nejat Khah Manavi and Mohammadreza Ardakani I took one measurement as a reference then used the program to figure out everything else.CLASSIFYING SALVIA SPECIES BY HIERARCHICAL CLUSTER ANALYSIS OF THEIR SEED FEATURES I used an open source program called ImageJ that lets you measure things is a bunch of different ways. Stands for a wire shelf in a small closet It can do stuff like hyperstacks - more than two dimensions, such as x,y, z (a microscope that scan vertically), t (time), c (multiple color channels). It's an open source piece of image analysis software, commonly used in biology for processing microscope images. Depending on needs, they can also get OsiriX, microdicom, or training on pydicom or matlab libraries. Through the use of a public domain program ( ImageJ), I was able to extract different information from the image.Īll my users get ImageJ. Can a smartphone capture a 3D image of the optic nerve?
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